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STT3B STT3 oligosaccharyltransferase complex catalytic subunit B [ Ochotona princeps (American pika) ]

Gene ID: 101534723, updated on 8-Mar-2024

Summary

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Gene symbol
STT3B
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit B
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See STT3B in Genome Data Viewer
Location:
chromosome: 30
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 30 NC_080861.1 (15670876..15754319)
102 previous assembly OchPri4.0 (GCF_014633375.1) 14A NC_050568.1 (6493707..6576713, complement)

Chromosome 30 - NC_080861.1Genomic Context describing neighboring genes Neighboring gene transforming growth factor beta receptor 2 Neighboring gene glutamate decarboxylase like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene oxysterol binding protein like 10 Neighboring gene neugrin-like Neighboring gene small Cajal body-specific RNA 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Names
STT3B, catalytic subunit of the oligosaccharyltransferase complex

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080861.1 Reference mOchPri1.hap1

    Range
    15670876..15754319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004588258.3 → XP_004588315.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    Conserved Domains (2) summary
    COG1287
    Location:70 → 792
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:71 → 563
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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