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RXYLT1 ribitol xylosyltransferase 1 [ Ochotona princeps (American pika) ]

Gene ID: 101534296, updated on 8-Mar-2024

Summary

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Gene symbol
RXYLT1
Gene description
ribitol xylosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Also known as
TMEM5
Orthologs
human mouse all
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Genomic context

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See RXYLT1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 15 NC_080846.1 (21052418..21071718)
102 previous assembly OchPri4.0 (GCF_014633375.1) 4 NC_050539.1 (22623563..22643786)

Chromosome 15 - NC_080846.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131482037 Neighboring gene uncharacterized LOC131482038 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1H Neighboring gene arginine vasopressin receptor 1A Neighboring gene SLIT-ROBO Rho GTPase activating protein 1 Neighboring gene uncharacterized LOC131482054 Neighboring gene uncharacterized LOC131482025

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1
Names
transmembrane protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080846.1 Reference mOchPri1.hap1

    Range
    21052418..21071718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004582991.4 → XP_004583048.2  ribitol-5-phosphate xylosyltransferase 1 isoform X1

  2. XM_058673668.1 → XP_058529651.1  ribitol-5-phosphate xylosyltransferase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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