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ACSL4 acyl-CoA synthetase long chain family member 4 [ Ochotona princeps (American pika) ]

Gene ID: 101529210, updated on 8-Mar-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) X NC_080865.1 (72909869..73000863, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) X Unlocalized Scaffold NW_023426578.1 (34489131..34575588, complement)

Chromosome X - NC_080865.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131478599 Neighboring gene nuclear transport factor 2 like export factor 2 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 5 Neighboring gene WD repeat-containing protein 20-like Neighboring gene uncharacterized LOC131478524 Neighboring gene N-alpha-acetyltransferase 20-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080865.1 Reference mOchPri1.hap1

    Range
    72909869..73000863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004590183.3 → XP_004590240.2  long-chain-fatty-acid--CoA ligase 4 isoform X2

  2. XM_058659036.1 → XP_058515019.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

  3. XM_036497865.2 → XP_036353758.2  long-chain-fatty-acid--CoA ligase 4 isoform X1

  4. XM_058659037.1 → XP_058515020.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

  5. XM_058659035.1 → XP_058515018.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

  6. XM_058659034.1 → XP_058515017.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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