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DERA deoxyribose-phosphate aldolase [ Ochotona princeps (American pika) ]

Gene ID: 101526831, updated on 8-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 27
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 27 NC_080858.1 (15193909..15264400, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 8A NC_050564.1 (16269167..16343247, complement)

Chromosome 27 - NC_080858.1Genomic Context describing neighboring genes Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene solute carrier family 15 member 5 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene EGFR pathway substrate 8, signaling adaptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080858.1 Reference mOchPri1.hap1

    Range
    15193909..15264400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004592591.4 → XP_004592648.1  deoxyribose-phosphate aldolase

    Conserved Domains (1) summary
    cd00959
    Location:50 → 291
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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