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ATRNL1 attractin like 1 [ Ochotona princeps (American pika) ]

Gene ID: 101526787, updated on 8-Mar-2024

Summary

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Gene symbol
ATRNL1
Gene description
attractin like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See ATRNL1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 13 NC_080844.1 (57430056..57988214)
102 previous assembly OchPri4.0 (GCF_014633375.1) 18 NC_050553.1 (12049431..12648290, complement)

Chromosome 13 - NC_080844.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA27 Neighboring gene ribosomal protein uL24-like Neighboring gene GDNF family receptor alpha 1 Neighboring gene coiled-coil domain containing 172

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080844.1 Reference mOchPri1.hap1

    Range
    57430056..57988214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058671950.1 → XP_058527933.1  attractin-like protein 1 isoform X1

  2. XM_058671951.1 → XP_058527934.1  attractin-like protein 1 isoform X2

RNA

  1. XR_009246557.1 RNA Sequence

  2. XR_009246558.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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