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A3GALT2 alpha 1,3-galactosyltransferase 2 [ Ochotona princeps (American pika) ]

Gene ID: 101523303, updated on 8-Mar-2024

Summary

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Gene symbol
A3GALT2
Gene description
alpha 1,3-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See A3GALT2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 2 NC_080833.1 (24271871..24287606, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 13 NC_050548.1 (23698962..23704087, complement)

Chromosome 2 - NC_080833.1Genomic Context describing neighboring genes Neighboring gene calmodulin-like Neighboring gene zinc finger protein 362 Neighboring gene polyhomeotic homolog 2 Neighboring gene uncharacterized LOC131482835

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080833.1 Reference mOchPri1.hap1

    Range
    24271871..24287606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058678529.1 → XP_058534512.1  alpha-1,3-galactosyltransferase 2 isoform X2

  2. XM_058678521.1 → XP_058534504.1  alpha-1,3-galactosyltransferase 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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