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DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 [ Ochotona princeps (American pika) ]

Gene ID: 101522917, updated on 8-Mar-2024

Summary

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Gene symbol
DNAJB6
Gene description
DnaJ heat shock protein family (Hsp40) member B6
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See DNAJB6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 2 NC_080833.1 (158158710..158224055, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 13A NC_050567.1 (5960249..6045473, complement)

Chromosome 2 - NC_080833.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene small nucleolar RNA SNORD77 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC131479636 Neighboring gene SERTA domain-containing protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080833.1 Reference mOchPri1.hap1

    Range
    158158710..158224055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058660655.1 → XP_058516638.1  dnaJ homolog subfamily B member 6 isoform X1

  2. XM_058660656.1 → XP_058516639.1  dnaJ homolog subfamily B member 6 isoform X2

  3. XM_058660654.1 → XP_058516637.1  dnaJ homolog subfamily B member 6 isoform X1

  4. XM_058660657.1 → XP_058516640.1  dnaJ homolog subfamily B member 6 isoform X3

  5. XM_058660659.1 → XP_058516642.1  dnaJ homolog subfamily B member 6 isoform X5

  6. XM_058660658.1 → XP_058516641.1  dnaJ homolog subfamily B member 6 isoform X4

RNA

  1. XR_009244951.1 RNA Sequence

Nucleotide Protein
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