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FAR1 fatty acyl-CoA reductase 1 [ Ochotona princeps (American pika) ]

Gene ID: 101522827, updated on 8-Mar-2024

Summary

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Gene symbol
FAR1
Gene description
fatty acyl-CoA reductase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See FAR1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 4 NC_080835.1 (43285538..43342627, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 1 NC_050536.1 (68834816..68892699)

Chromosome 4 - NC_080835.1Genomic Context describing neighboring genes Neighboring gene RAS related 2 Neighboring gene spondin 1 Neighboring gene H/ACA ribonucleoprotein complex subunit 3-like Neighboring gene small nucleolar RNA SNORA13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acyl-CoA reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080835.1 Reference mOchPri1.hap1

    Range
    43285538..43342627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058663342.1 → XP_058519325.1  fatty acyl-CoA reductase 1 isoform X1

  2. XM_058663339.1 → XP_058519322.1  fatty acyl-CoA reductase 1 isoform X1

  3. XM_058663340.1 → XP_058519323.1  fatty acyl-CoA reductase 1 isoform X2

  4. XM_004593764.4 → XP_004593821.1  fatty acyl-CoA reductase 1 isoform X4

    Conserved Domains (3) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 446
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  5. XM_012929397.2 → XP_012784851.1  fatty acyl-CoA reductase 1 isoform X3

    Conserved Domains (3) summary
    cd09071
    Location:355 → 446
    FAR_C; C-terminal domain of fatty acyl CoA reductases
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 446
    PLN02996; fatty acyl-CoA reductase

  6. XM_058663344.1 → XP_058519327.1  fatty acyl-CoA reductase 1 isoform X4

  7. XM_058663341.1 → XP_058519324.1  fatty acyl-CoA reductase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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