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ACSBG1 acyl-CoA synthetase bubblegum family member 1 [ Ochotona princeps (American pika) ]

Gene ID: 101521672, updated on 8-Mar-2024

Summary

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Gene symbol
ACSBG1
Gene description
acyl-CoA synthetase bubblegum family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See ACSBG1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 6 NC_080837.1 (10629578..10671058, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 17 NC_050552.1 (83183836..83224759)

Chromosome 6 - NC_080837.1Genomic Context describing neighboring genes Neighboring gene calcium and integrin binding family member 2 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha Neighboring gene DnaJ heat shock protein family (Hsp40) member A4 Neighboring gene SKI8 subunit of superkiller complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase ACSBG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080837.1 Reference mOchPri1.hap1

    Range
    10629578..10671058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004577907.4 → XP_004577964.2  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X2

  2. XM_058665564.1 → XP_058521547.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X1

  3. XM_058665565.1 → XP_058521548.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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