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ACADSB acyl-CoA dehydrogenase short/branched chain [ Ochotona princeps (American pika) ]

Gene ID: 101520488, updated on 8-Mar-2024

Summary

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Gene symbol
ACADSB
Gene description
acyl-CoA dehydrogenase short/branched chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See ACADSB in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 13 NC_080844.1 (63099368..63155316)
102 previous assembly OchPri4.0 (GCF_014633375.1) 18 NC_050553.1 (6559742..6593129, complement)

Chromosome 13 - NC_080844.1Genomic Context describing neighboring genes Neighboring gene phosphoseryl-tRNA kinase Neighboring gene IKAROS family zinc finger 5 Neighboring gene H6 family homeobox 3 Neighboring gene H6 family homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080844.1 Reference mOchPri1.hap1

    Range
    63099368..63155316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058671381.1 → XP_058527364.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

  2. XM_012925515.3 → XP_012780969.2  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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