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ACSM3 acyl-CoA synthetase medium chain family member 3 [ Ochotona princeps (American pika) ]

Gene ID: 101517652, updated on 8-Mar-2024

Summary

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Gene symbol
ACSM3
Gene description
acyl-CoA synthetase medium chain family member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See ACSM3 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 24 NC_080855.1 (19465023..19491767)
102 previous assembly OchPri4.0 (GCF_014633375.1) 6 NC_050541.1 (17987694..18028215)

Chromosome 24 - NC_080855.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131483273 Neighboring gene THUMP domain containing 1 Neighboring gene acyl-coenzyme A synthetase ACSM4, mitochondrial Neighboring gene ERI1 exoribonuclease family member 2 Neighboring gene U6 spliceosomal RNA Neighboring gene RNA exonuclease 5 Neighboring gene defective in cullin neddylation 1 domain containing 3 Neighboring gene LYR motif containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A synthetase ACSM3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080855.1 Reference mOchPri1.hap1

    Range
    19465023..19491767
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004586798.3 → XP_004586855.2  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X1

  2. XM_012927497.2 → XP_012782951.2  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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