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LOC101508505 protein HOTHEAD-like [ Cicer arietinum (chickpea) ]

Gene ID: 101508505, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101508505
Gene description
protein HOTHEAD-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101508505 in Genome Data Viewer
Location:
chromosome: Ca7
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca7 NC_021166.1 (31816946..31824792)

Chromosome Ca7 - NC_021166.1Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L30 Neighboring gene protein ROOT HAIR DEFECTIVE 3 Neighboring gene receptor-like serine/threonine-protein kinase ALE2 Neighboring gene NDR1/HIN1-like protein 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021166.1 Chromosome Ca7 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on CH-OH group of donors IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein HOTHEAD-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021166.1 Reference ASM33114v1 Primary Assembly

    Range
    31816946..31824792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004510320.3 → XP_004510377.1  protein HOTHEAD-like

    UniProtKB/TrEMBL
    A0A1S2YV19
    Conserved Domains (3) summary
    PLN02785
    Location:27 → 591
    PLN02785; Protein HOTHEAD
    pfam05199
    Location:430 → 573
    GMC_oxred_C; GMC oxidoreductase
    cl21454
    Location:60 → 332
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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