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LOC101505962 probable xyloglucan endotransglucosylase/hydrolase protein 26 [ Cicer arietinum (chickpea) ]

Gene ID: 101505962, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101505962
Gene description
probable xyloglucan endotransglucosylase/hydrolase protein 26
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101505962 in Genome Data Viewer
Location:
chromosome: Ca8
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca8 NC_021167.1 (15511470..15513981)

Chromosome Ca8 - NC_021167.1Genomic Context describing neighboring genes Neighboring gene protein SPEAR3-like Neighboring gene aldehyde oxidase GLOX1-like Neighboring gene casein kinase 1-like protein 3 Neighboring gene probable lactoylglutathione lyase, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021167.1 Chromosome Ca8 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable xyloglucan endotransglucosylase/hydrolase protein 26

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021167.1 Reference ASM33114v1 Primary Assembly

    Range
    15511470..15513981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004512961.2 → XP_004513018.1  probable xyloglucan endotransglucosylase/hydrolase protein 26

    UniProtKB/TrEMBL
    A0A1S2Z0X0
    Conserved Domains (2) summary
    PLN03161
    Location:22 → 288
    PLN03161; Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
    cd02176
    Location:22 → 283
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16
Nucleotide Protein
Heading Accession and Version

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