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LOC101502572 pectinesterase [ Cicer arietinum (chickpea) ]

Gene ID: 101502572, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101502572
Gene description
pectinesterase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101502572 in Genome Data Viewer
Location:
chromosome: Ca6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca6 NC_021165.1 (2981706..2984672, complement)

Chromosome Ca6 - NC_021165.1Genomic Context describing neighboring genes Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 Neighboring gene phosphoglucomutase, cytoplasmic Neighboring gene aspartate--tRNA ligase, chloroplastic/mitochondrial Neighboring gene pectinesterase inhibitor 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021165.1 Chromosome Ca6 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021165.1 Reference ASM33114v1 Primary Assembly

    Range
    2981706..2984672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004503324.3 → XP_004503381.1  pectinesterase

    UniProtKB/TrEMBL
    A0A1S2YES3
    Conserved Domains (3) summary
    PLN02713
    Location:36 → 546
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01095
    Location:234 → 531
    Pectinesterase; Pectinesterase
    pfam04043
    Location:35 → 175
    PMEI; Plant invertase/pectin methylesterase inhibitor
Nucleotide Protein
Heading Accession and Version

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