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LOC101502042 berberine bridge enzyme-like 13 [ Cicer arietinum (chickpea) ]

Gene ID: 101502042, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101502042
Gene description
berberine bridge enzyme-like 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101502042 in Genome Data Viewer
Location:
chromosome: Ca6
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca6 NC_021165.1 (14181574..14183567, complement)

Chromosome Ca6 - NC_021165.1Genomic Context describing neighboring genes Neighboring gene dihydroceramide fatty acyl 2-hydroxylase FAH2 Neighboring gene berberine bridge enzyme-like 13 Neighboring gene berberine bridge enzyme-like 21 Neighboring gene berberine bridge enzyme-like 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021165.1 Chromosome Ca6 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
berberine bridge enzyme-like 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021165.1 Reference ASM33114v1 Primary Assembly

    Range
    14181574..14183567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004504665.3 → XP_004504722.1  berberine bridge enzyme-like 13

    UniProtKB/TrEMBL
    A0A1S2YHP6
    Conserved Domains (3) summary
    COG0277
    Location:48 → 529
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:77 → 216
    FAD_binding_4; FAD binding domain
    pfam08031
    Location:470 → 527
    BBE; Berberine and berberine like
Nucleotide Protein
Heading Accession and Version

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