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LOC101496665 xyloglucan endotransglucosylase/hydrolase 2 [ Cicer arietinum (chickpea) ]

Gene ID: 101496665, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101496665
Gene description
xyloglucan endotransglucosylase/hydrolase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101496665 in Genome Data Viewer
Location:
chromosome: Ca5
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca5 NC_021164.1 (42358693..42360336, complement)

Chromosome Ca5 - NC_021164.1Genomic Context describing neighboring genes Neighboring gene receptor-like kinase TMK4 Neighboring gene UDP-glycosyltransferase 75C1 Neighboring gene uncharacterized LOC101496977 Neighboring gene protein PRD1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021164.1 Chromosome Ca5 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan endotransglucosylase/hydrolase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021164.1 Reference ASM33114v1 Primary Assembly

    Range
    42358693..42360336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004502202.3 → XP_004502259.1  xyloglucan endotransglucosylase/hydrolase 2

    UniProtKB/TrEMBL
    A0A1S2YB65
    Conserved Domains (1) summary
    cd02176
    Location:24 → 269
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16
Nucleotide Protein
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