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LOC101494780 alpha-L-fucosidase 1-like [ Cicer arietinum (chickpea) ]

Gene ID: 101494780, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101494780
Gene description
alpha-L-fucosidase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101494780 in Genome Data Viewer
Location:
chromosome: Ca4
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca4 NC_021163.1 (13097543..13100760)

Chromosome Ca4 - NC_021163.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 5-like Neighboring gene protein MAIN-LIKE 1-like Neighboring gene cytochrome P450 704C1-like Neighboring gene DEAD-box ATP-dependent RNA helicase 7 Neighboring gene uncharacterized LOC113786114

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021163.1 Chromosome Ca4 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-L-fucosidase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021163.1 Reference ASM33114v1 Primary Assembly

    Range
    13097543..13100760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004496592.3 → XP_004496649.1  alpha-L-fucosidase 1-like

    UniProtKB/TrEMBL
    A0A1S2XYU4
    Conserved Domains (2) summary
    COG3669
    Location:44 → 479
    AfuC; Alpha-L-fucosidase [Carbohydrate transport and metabolism]
    cl07893
    Location:78 → 338
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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