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LOC101492791 sulfoquinovosyl transferase SQD2 [ Cicer arietinum (chickpea) ]

Gene ID: 101492791, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101492791
Gene description
sulfoquinovosyl transferase SQD2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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Genomic context

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See LOC101492791 in Genome Data Viewer
Location:
chromosome: Ca6
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca6 NC_021165.1 (48101994..48107749)

Chromosome Ca6 - NC_021165.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105852408 Neighboring gene UPF0481 protein At3g47200-like Neighboring gene protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1-like Neighboring gene probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021165.1 Chromosome Ca6 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021165.1 Reference ASM33114v1 Primary Assembly

    Range
    48101994..48107749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004506725.3 → XP_004506782.1  sulfoquinovosyl transferase SQD2

    UniProtKB/TrEMBL
    A0A1S2YLX2
    Conserved Domains (2) summary
    cd03814
    Location:108 → 473
    GT1_like_2; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can ...
    PLN02871
    Location:76 → 511
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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