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LOC101489689 pectinesterase 3-like [ Cicer arietinum (chickpea) ]

Gene ID: 101489689, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101489689
Gene description
pectinesterase 3-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cicer arietinum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
Also known as
pme1
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Genomic context

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See LOC101489689 in Genome Data Viewer
Location:
chromosome: Ca7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM33114v1 (GCF_000331145.1) Ca7 NC_021166.1 (33843591..33849390, complement)

Chromosome Ca7 - NC_021166.1Genomic Context describing neighboring genes Neighboring gene alanine aminotransferase 2-like Neighboring gene pectinesterase 3 Neighboring gene exocyst complex component SEC10b Neighboring gene ubiquitin-conjugating enzyme E2 34-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021166.1 Chromosome Ca7 Reference ASM33114v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 3-like
Names
pectin methylesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001278972.1 → NP_001265901.1  pectinesterase 3-like

    See identical proteins and their annotated locations for NP_001265901.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ609276
    UniProtKB/TrEMBL
    Q708X4
    Conserved Domains (3) summary
    PLN02313
    Location:1 → 584
    PLN02313; Pectinesterase/pectinesterase inhibitor
    cd15798
    Location:69 → 226
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:280 → 570
    Pectinesterase; Pectinesterase

RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM33114v1 Primary Assembly

Genomic

  1. NC_021166.1 Reference ASM33114v1 Primary Assembly

    Range
    33843591..33849390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012718645.2 → XP_012574099.1  pectinesterase 3-like isoform X1

    UniProtKB/TrEMBL
    A0A1S3EFE9
    Conserved Domains (3) summary
    PLN02313
    Location:1 → 584
    PLN02313; Pectinesterase/pectinesterase inhibitor
    pfam01095
    Location:280 → 570
    Pectinesterase; Pectinesterase
    cd15798
    Location:69 → 226
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
Nucleotide Protein
Heading Accession and Version

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