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LOC101487325 mitochondrial carnitine/acylcarnitine carrier protein [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101487325, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101487325
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
See related
Ensembl:ENSMZEG00005011794
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
slc25a20
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Genomic context

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See LOC101487325 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
21
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG5 NC_036784.1 (17328348..17349443, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531721.1 (351402..360296)

Linkage Group LG5 - NC_036784.1Genomic Context describing neighboring genes Neighboring gene msx2-interacting protein Neighboring gene filamin binding LIM protein 1 Neighboring gene NCK interacting protein with SH3 domain Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-dependent protein kinase type II-alpha regulatory subunit; mitochondrial carnitine/acylcarnitine carrier protein
Names
solute carrier family 25 member 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036784.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    17328348..17349443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004544749.3 → XP_004544806.2  cAMP-dependent protein kinase type II-alpha regulatory subunit isoform X2

    Conserved Domains (3) summary
    cd00038
    Location:465 → 585
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00153
    Location:108 → 198
    Mito_carr; Mitochondrial carrier protein
    cl02594
    Location:206 → 246
    DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains

  2. XM_004544748.4 → XP_004544805.2  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    A0A3P9C0F5
    Related
    ENSMZEP00005015718.1, ENSMZET00005016225.1
    Conserved Domains (1) summary
    pfam00153
    Location:108 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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