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LOC101486336 SAGA-associated factor 29 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101486336, updated on 25-Jan-2024

Summary

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Gene symbol
LOC101486336
Gene description
SAGA-associated factor 29
See related
Ensembl:ENSMZEG00005001194
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
sgf29; ccdc101
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Genomic context

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See LOC101486336 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
10
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG4 NC_036783.1 (28058884..28063456)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531757.1 (2916898..2921450, complement)

Linkage Group LG4 - NC_036783.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112434702 Neighboring gene nuclear protein 1 Neighboring gene nuclear factor of activated T cells 2 interacting protein Neighboring gene protein spinster homolog 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SAGA-associated factor 29
Names
SAGA complex associated factor 29
SAGA-associated factor 29 homolog
coiled-coil domain containing 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036783.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    28058884..28063456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004556473.3 → XP_004556530.1  SAGA-associated factor 29

    See identical proteins and their annotated locations for XP_004556530.1

    UniProtKB/TrEMBL
    A0A3P9AUP8
    Related
    ENSMZEP00005001445.1, ENSMZET00005001535.1
    Conserved Domains (1) summary
    pfam07039
    Location:155 → 285
    DUF1325; SGF29 tudor-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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