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galnt11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101481338, updated on 8-Mar-2024

Summary

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Gene symbol
galnt11
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
See related
Ensembl:ENSMZEG00005020076
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See galnt11 in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
12
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG9 NC_036788.1 (17348180..17358003)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531888.1 (544941..555135, complement)

Linkage Group LG9 - NC_036788.1Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific methyltransferase 2Ca Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene endothelial zinc finger protein induced by tumor necrosis factor alpha Neighboring gene chondrolectin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 11
Names
polypeptide N-acetylgalactosaminyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036788.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    17348180..17358003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024803706.1 → XP_024659474.1  LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A3P9CX06
    Related
    ENSMZEP00005026910.1, ENSMZET00005027774.1
    Conserved Domains (2) summary
    cd02510
    Location:130 → 428
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:458 → 580
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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