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si:dkey-243k1.3 endonuclease domain-containing 1 protein-like [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101481189, updated on 8-Mar-2024

Summary

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Gene symbol
si:dkey-243k1.3
Gene description
endonuclease domain-containing 1 protein-like
See related
Ensembl:ENSMZEG00005005484
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
zebrafish all
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Genomic context

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See si:dkey-243k1.3 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
6
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (7292162..7294136)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531795.1 (108163..110132, complement)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene NUMB like endocytic adaptor protein Neighboring gene zinc finger FYVE domain-containing protein 1 Neighboring gene double PHD fingers 1 Neighboring gene TRPM8 channel-associated factor homolog Neighboring gene TRPM8 channel-associated factor homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    7292162..7294136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004562763.3 → XP_004562820.1  endonuclease domain-containing 1 protein-like

    UniProtKB/TrEMBL
    A0A3P9BB59, A0A3P9BB63
    Related
    ENSMZEP00005007139.1, ENSMZET00005007449.1
    Conserved Domains (1) summary
    smart00892
    Location:60 → 239
    Endonuclease_NS; DNA/RNA non-specific endonuclease
Nucleotide Protein
Heading Accession and Version

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