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mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101481161, updated on 8-Mar-2024

Summary

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Gene symbol
mgat5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSMZEG00005003509
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See mgat5 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
16
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG23 NC_036801.1 (31194811..31279171, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531741.1 (663928..772277, complement)

Linkage Group LG23 - NC_036801.1Genomic Context describing neighboring genes Neighboring gene cyclin-T2 Neighboring gene transmembrane protein 163 Neighboring gene chloride intracellular channel 5a Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036801.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    31194811..31279171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014413148.2 → XP_014268634.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A3P9B3S5
    Related
    ENSMZEP00005004541.1, ENSMZET00005004743.1
    Conserved Domains (2) summary
    pfam15027
    Location:5 → 138
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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