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ebna1bp2 EBNA1 binding protein 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101477778, updated on 8-Mar-2024

Summary

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Gene symbol
ebna1bp2
Gene description
EBNA1 binding protein 2
See related
Ensembl:ENSMZEG00005018968
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See ebna1bp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
104 current M_zebra_UMD2a (GCF_000238955.4) Unplaced Scaffold NW_020192420.1 (286177..289370, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531790.1 (2826694..2829888)

NW_020192420.1Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor Neighboring gene doublesex and mab-3 related transcription factor 2b Neighboring gene cilia and flagella associated protein 144 Neighboring gene transmembrane protein 125 Neighboring gene adaptor related protein complex 1 subunit mu 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable rRNA-processing protein EBP2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NW_020192420.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    286177..289370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004562142.2 → XP_004562199.1  probable rRNA-processing protein EBP2

    UniProtKB/TrEMBL
    A0A3P9CST3
    Related
    ENSMZEP00005025420.1, ENSMZET00005026243.1
    Conserved Domains (1) summary
    pfam05890
    Location:29 → 305
    Ebp2; Eukaryotic rRNA processing protein EBP2
Nucleotide Protein
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