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inpp5d inositol polyphosphate-5-phosphatase D [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101476435, updated on 8-Mar-2024

Summary

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Gene symbol
inpp5d
Gene description
inositol polyphosphate-5-phosphatase D
See related
Ensembl:ENSMZEG00005008710
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See inpp5d in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
27
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG23 NC_036801.1 (12856045..12873250, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531742.1 (2631250..2648500, complement)

Linkage Group LG23 - NC_036801.1Genomic Context describing neighboring genes Neighboring gene BCL6A transcription repressor a Neighboring gene smx5 Neighboring gene G protein-coupled receptor 17 Neighboring gene unconventional myosin-VIIa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
Names
inositol polyphosphate-5-phosphatase, 145kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036801.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    12856045..12873250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004552841.5 → XP_004552898.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

    UniProtKB/TrEMBL
    A0A3P9BNW4
    Related
    ENSMZEP00005011609.1, ENSMZET00005012011.1
    Conserved Domains (2) summary
    cd10343
    Location:5 → 104
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)
    cl00490
    Location:389 → 695
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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