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LOC101476428 endonuclease domain-containing 1 protein [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101476428, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101476428
Gene description
endonuclease domain-containing 1 protein
See related
Ensembl:ENSMZEG00005019891
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101476428 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
3
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG3 NC_036782.1 (12468020..12473636, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004532005.1 (172982..178618)

Linkage Group LG3 - NC_036782.1Genomic Context describing neighboring genes Neighboring gene mucin-5AC-like Neighboring gene cell wall protein IFF6-like Neighboring gene Fc receptor-like protein 5 Neighboring gene butyrophilin subfamily 2 member A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036782.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    12468020..12473636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004574663.4 → XP_004574720.1  endonuclease domain-containing 1 protein

    UniProtKB/TrEMBL
    A0A3P9CWA4
    Related
    ENSMZEP00005026675.1, ENSMZET00005027532.1
    Conserved Domains (1) summary
    smart00892
    Location:101 → 286
    Endonuclease_NS; DNA/RNA non-specific endonuclease
Nucleotide Protein
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