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mbnl2 muscleblind-like splicing regulator 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101474967, updated on 8-Mar-2024

Summary

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Gene symbol
mbnl2
Gene description
muscleblind-like splicing regulator 2
See related
Ensembl:ENSMZEG00005005609
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See mbnl2 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
13
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG23 NC_036801.1 (36213530..36269800, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531741.1 (5839158..5893613, complement)

Linkage Group LG23 - NC_036801.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rap-2a Neighboring gene mitochondrial ribosomal protein L39 Neighboring gene zona pellucida sperm-binding protein 3 Neighboring gene par-3 family cell polarity regulator beta a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
muscleblind-like protein 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036801.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    36213530..36269800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004552643.5 → XP_004552700.2  muscleblind-like protein 2a isoform X1

    See identical proteins and their annotated locations for XP_004552700.2

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  2. XM_012919464.4 → XP_012774918.1  muscleblind-like protein 2a isoform X1

    See identical proteins and their annotated locations for XP_012774918.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  3. XM_004552650.3 → XP_004552707.1  muscleblind-like protein 2a isoform X5

    See identical proteins and their annotated locations for XP_004552707.1

    Related
    ENSMZEP00005007298.1, ENSMZET00005007608.1
    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  4. XM_004552647.3 → XP_004552704.1  muscleblind-like protein 2a isoform X3

    See identical proteins and their annotated locations for XP_004552704.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  5. XM_004552644.3 → XP_004552701.1  muscleblind-like protein 2a isoform X1

    See identical proteins and their annotated locations for XP_004552701.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  6. XM_004552640.5 → XP_004552697.2  muscleblind-like protein 2a isoform X1

    See identical proteins and their annotated locations for XP_004552697.2

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  7. XM_012919465.3 → XP_012774919.1  muscleblind-like protein 2a isoform X1

    See identical proteins and their annotated locations for XP_012774919.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  8. XM_012919466.4 → XP_012774920.1  muscleblind-like protein 2a isoform X10

    See identical proteins and their annotated locations for XP_012774920.1

    UniProtKB/TrEMBL
    A0A3P9BBM3
    Related
    ENSMZEP00005007290.1, ENSMZET00005007600.1
    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  9. XM_004552655.5 → XP_004552712.1  muscleblind-like protein 2a isoform X9

    See identical proteins and their annotated locations for XP_004552712.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  10. XM_004552652.5 → XP_004552709.1  muscleblind-like protein 2a isoform X7

    See identical proteins and their annotated locations for XP_004552709.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  11. XM_004552654.5 → XP_004552711.1  muscleblind-like protein 2a isoform X8

    See identical proteins and their annotated locations for XP_004552711.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  12. XM_004552649.5 → XP_004552706.1  muscleblind-like protein 2a isoform X4

    See identical proteins and their annotated locations for XP_004552706.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  13. XM_004552651.5 → XP_004552708.1  muscleblind-like protein 2a isoform X6

    See identical proteins and their annotated locations for XP_004552708.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger

  14. XM_004552645.5 → XP_004552702.1  muscleblind-like protein 2a isoform X2

    See identical proteins and their annotated locations for XP_004552702.1

    Conserved Domains (1) summary
    smart00356
    Location:179 → 203
    ZnF_C3H1; zinc finger
Nucleotide Protein
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