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eif4g1 eukaryotic translation initiation factor 4 gamma 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101474721, updated on 21-Dec-2023

Summary

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Gene symbol
eif4g1
Gene description
eukaryotic translation initiation factor 4 gamma 1
See related
Ensembl:ENSMZEG00005003561
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See eif4g1 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
36
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (4328918..4366742)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531795.1 (2168372..2206206)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene serine protease 59, putative Neighboring gene proteasome 26S subunit ubiquitin receptor, non-ATPase 2 Neighboring gene alkaline phosphatase 3 Neighboring gene family with sequence similarity 131 member Ab

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4 gamma 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    4328918..4366742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023153237.2 → XP_023009005.2  eukaryotic translation initiation factor 4 gamma 1 isoform X1

    UniProtKB/TrEMBL
    A0A3P9B3W1
    Conserved Domains (4) summary
    cd11559
    Location:1608 → 1736
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1409 → 1521
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:894 → 1122
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 567
    Atrophin-1; Atrophin-1 family

  2. XM_004562834.4 → XP_004562891.2  eukaryotic translation initiation factor 4 gamma 1 isoform X5

    UniProtKB/TrEMBL
    A0A3P9B3W1
    Related
    ENSMZEP00005004574.1, ENSMZET00005004777.1
    Conserved Domains (4) summary
    cd11559
    Location:1579 → 1707
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1380 → 1492
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:865 → 1093
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 567
    Atrophin-1; Atrophin-1 family

  3. XM_014409516.3 → XP_014265002.2  eukaryotic translation initiation factor 4 gamma 1 isoform X2

    UniProtKB/TrEMBL
    A0A3P9B3W1
    Conserved Domains (4) summary
    cd11559
    Location:1607 → 1735
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1408 → 1520
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:893 → 1121
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 567
    Atrophin-1; Atrophin-1 family

  4. XM_004562832.5 → XP_004562889.2  eukaryotic translation initiation factor 4 gamma 1 isoform X3

    UniProtKB/TrEMBL
    A0A3P9B3W1
    Conserved Domains (4) summary
    cd11559
    Location:1601 → 1729
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1402 → 1514
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:887 → 1115
    MIF4G; MIF4G domain
    cl26464
    Location:12 → 560
    Atrophin-1; Atrophin-1 family

  5. XM_004562833.5 → XP_004562890.2  eukaryotic translation initiation factor 4 gamma 1 isoform X4

    UniProtKB/TrEMBL
    A0A3P9B3Y3
    Conserved Domains (4) summary
    cd11559
    Location:1590 → 1718
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1391 → 1503
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:876 → 1104
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 549
    Atrophin-1; Atrophin-1 family

  6. XM_012922317.3 → XP_012777771.2  eukaryotic translation initiation factor 4 gamma 1 isoform X9

    UniProtKB/TrEMBL
    A0A3P9B3Y3
    Related
    ENSMZEP00005004618.1, ENSMZET00005004818.1
    Conserved Domains (4) summary
    cd11559
    Location:1561 → 1689
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1362 → 1474
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:847 → 1075
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 549
    Atrophin-1; Atrophin-1 family

  7. XM_004562831.5 → XP_004562888.2  eukaryotic translation initiation factor 4 gamma 1 isoform X1

    UniProtKB/TrEMBL
    A0A3P9B3W1
    Conserved Domains (4) summary
    cd11559
    Location:1608 → 1736
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1409 → 1521
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:894 → 1122
    MIF4G; MIF4G domain
    cl26464
    Location:2 → 567
    Atrophin-1; Atrophin-1 family

  8. XM_004562835.4 → XP_004562892.2  eukaryotic translation initiation factor 4 gamma 1 isoform X6

    UniProtKB/TrEMBL
    A0A3P9B3Y3
    Conserved Domains (4) summary
    cd11559
    Location:1451 → 1579
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1252 → 1364
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:737 → 965
    MIF4G; MIF4G domain
    cl26464
    Location:75 → 407
    Atrophin-1; Atrophin-1 family

  9. XM_004562836.5 → XP_004562893.2  eukaryotic translation initiation factor 4 gamma 1 isoform X7

    UniProtKB/TrEMBL
    A0A3P9B3Y3
    Conserved Domains (4) summary
    cd11559
    Location:1417 → 1545
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1218 → 1330
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:703 → 931
    MIF4G; MIF4G domain
    cl26464
    Location:41 → 373
    Atrophin-1; Atrophin-1 family

  10. XM_004562837.5 → XP_004562894.2  eukaryotic translation initiation factor 4 gamma 1 isoform X8

    UniProtKB/TrEMBL
    A0A3P9B3Y3
    Conserved Domains (4) summary
    cd11559
    Location:1374 → 1502
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:1175 → 1287
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    pfam02854
    Location:660 → 888
    MIF4G; MIF4G domain
    cl26464
    Location:6 → 333
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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