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rps2 ribosomal protein S2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101473842, updated on 8-Mar-2024

Summary

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Gene symbol
rps2
Gene description
ribosomal protein S2
See related
Ensembl:ENSMZEG00005000776
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See rps2 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
6
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG4 NC_036783.1 (15185742..15187328)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531766.1 (1245158..1246739, complement)

Linkage Group LG4 - NC_036783.1Genomic Context describing neighboring genes Neighboring gene transducin beta like 3 Neighboring gene ring finger protein 151 Neighboring gene beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like Neighboring gene NADH:ubiquinone oxidoreductase subunit B10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036783.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    15185742..15187328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004558359.4 → XP_004558416.1  40S ribosomal protein S2

    See identical proteins and their annotated locations for XP_004558416.1

    UniProtKB/TrEMBL
    A0A3P9AT48
    Related
    ENSMZEP00005000890.1, ENSMZET00005000966.1
    Conserved Domains (1) summary
    PTZ00070
    Location:40 → 264
    PTZ00070; 40S ribosomal protein S2; Provisional
Nucleotide Protein
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