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rpl35a ribosomal protein L35a [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101473507, updated on 8-Mar-2024

Summary

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Gene symbol
rpl35a
Gene description
ribosomal protein L35a
See related
Ensembl:ENSMZEG00005002093
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See rpl35a in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
5
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (37446086..37450588, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531930.1 (406972..411542)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene arginyl aminopeptidase like 1 Neighboring gene ATP-binding cassette, sub-family C (CFTR/MRP), member 5 Neighboring gene leucine-rich repeats and calponin homology (CH) domain containing 3 Neighboring gene ATP-binding cassette, sub-family F (GCN20), member 3 Neighboring gene coagulation factor VII

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L35a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    37446086..37450588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014410820.3 → XP_014266306.1  60S ribosomal protein L35a

    UniProtKB/TrEMBL
    A0A3P9AYB6, A0A3P9AYD7
    Related
    ENSMZEP00005002653.1, ENSMZET00005002768.1
    Conserved Domains (1) summary
    pfam01247
    Location:5 → 103
    Ribosomal_L35Ae; Ribosomal protein L35Ae
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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