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LOC101471938 endonuclease domain-containing 1 protein [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101471938, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101471938
Gene description
endonuclease domain-containing 1 protein
See related
Ensembl:ENSMZEG00005004906
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101471938 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
11
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG19 NC_036798.1 (7204016..7215886)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531873.1 (703467..707985, complement)

Linkage Group LG19 - NC_036798.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 68 Neighboring gene daple-like protein Neighboring gene coiled-coil domain containing 88C Neighboring gene interferon-inducible GTPase 1-like Neighboring gene MAGUK p55 subfamily member 5-A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036798.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    7204016..7215886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023153614.2 → XP_023009382.1  endonuclease domain-containing 1 protein isoform X1

    Conserved Domains (1) summary
    smart00892
    Location:104 → 287
    Endonuclease_NS; DNA/RNA non-specific endonuclease

  2. XM_023153615.1 → XP_023009383.1  endonuclease domain-containing 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A3P9B943
    Conserved Domains (1) summary
    smart00892
    Location:54 → 237
    Endonuclease_NS; DNA/RNA non-specific endonuclease

  3. XM_004569924.2 → XP_004569981.1  endonuclease domain-containing 1 protein isoform X2

    See identical proteins and their annotated locations for XP_004569981.1

    UniProtKB/TrEMBL
    A0A3P9B943
    Related
    ENSMZEP00005006321.1, ENSMZET00005006610.1
    Conserved Domains (1) summary
    smart00892
    Location:54 → 237
    Endonuclease_NS; DNA/RNA non-specific endonuclease

  4. XM_004569926.3 → XP_004569983.1  endonuclease domain-containing 1 protein isoform X2

    See identical proteins and their annotated locations for XP_004569983.1

    UniProtKB/TrEMBL
    A0A3P9B943
    Conserved Domains (1) summary
    smart00892
    Location:54 → 237
    Endonuclease_NS; DNA/RNA non-specific endonuclease

  5. XM_004569925.3 → XP_004569982.1  endonuclease domain-containing 1 protein isoform X2

    See identical proteins and their annotated locations for XP_004569982.1

    UniProtKB/TrEMBL
    A0A3P9B943
    Conserved Domains (1) summary
    smart00892
    Location:54 → 237
    Endonuclease_NS; DNA/RNA non-specific endonuclease
Nucleotide Protein
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