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LOC101471485 torsin-1A-interacting protein 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101471485, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101471485
Gene description
torsin-1A-interacting protein 1
See related
Ensembl:ENSMZEG00005007386
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101471485 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG23 NC_036801.1 (2639591..2644548, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531751.1 (3408658..3413620)

Linkage Group LG23 - NC_036801.1Genomic Context describing neighboring genes Neighboring gene chemokine XC receptor 1-like Neighboring gene putative ferric-chelate reductase 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene olfactomedin-like 2Ba

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036801.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    2639591..2644548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004555026.5 → XP_004555083.1  torsin-1A-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3P9BIJ4
    Related
    ENSMZEP00005009754.1, ENSMZET00005010114.1
    Conserved Domains (1) summary
    pfam05609
    Location:315 → 527
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_004555025.5 → XP_004555082.1  torsin-1A-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:317 → 529
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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