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LOC101470918 ras-related protein ORAB-1-like [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101470918, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101470918
Gene description
ras-related protein ORAB-1-like
See related
Ensembl:ENSMZEG00005024685
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101470918 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
6
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (34446500..34452537)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004532490.1 (4784..9442)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112435938 Neighboring gene uncharacterized LOC101477415 Neighboring gene mRNA decay activator protein ZFP36L1 Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene uncharacterized LOC112435867

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein ORAB-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    34446500..34452537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004576440.1 → XP_004576497.1  ras-related protein ORAB-1-like

    See identical proteins and their annotated locations for XP_004576497.1

    UniProtKB/TrEMBL
    A0A3P9DFD5
    Related
    ENSMZEP00005033094.1, ENSMZET00005034197.1
    Conserved Domains (1) summary
    cd01869
    Location:7 → 172
    Rab1_Ypt1; Rab GTPase family 1 includes the yeast homolog Ypt1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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