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hs3st1l1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101469297, updated on 8-Mar-2024

Summary

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Gene symbol
hs3st1l1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1
See related
Ensembl:ENSMZEG00005012280
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
zebrafish all
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Genomic context

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See hs3st1l1 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
2
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG13 NC_036792.1 (25535057..25564424)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531749.1 (853747..881432)

Linkage Group LG13 - NC_036792.1Genomic Context describing neighboring genes Neighboring gene deoxynucleotidyltransferase, terminal Neighboring gene uncharacterized LOC112435716 Neighboring gene uncharacterized LOC112435728 Neighboring gene ventral expressed homeobox Neighboring gene ventral homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036792.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    25535057..25564424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004554553.1 → XP_004554610.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A3P9C2L6
    Related
    ENSMZEP00005016347.1, ENSMZET00005016866.1
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 259
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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