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LOC101466934 VIP36-like protein [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101466934, updated on 19-Jun-2024

Summary

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Gene symbol
LOC101466934
Gene description
VIP36-like protein
See related
Ensembl:ENSMZEG00005003388
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101466934 in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG12 NC_036791.1 (6047824..6058057)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531823.1 (1913742..1924002)

Linkage Group LG12 - NC_036791.1Genomic Context describing neighboring genes Neighboring gene TM2 domain containing 2 Neighboring gene T-box transcription factor TBX2-A Neighboring gene leukocyte surface antigen CD53 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036791.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    6047824..6058057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004565816.2 → XP_004565873.1  VIP36-like protein

    UniProtKB/TrEMBL
    A0A3P9B369, A0A3P9B393
    Related
    ENSMZEP00005004349.1, ENSMZET00005004549.1
    Conserved Domains (1) summary
    cl14058
    Location:56 → 303
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases