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rab30 RAB30, member RAS oncogene family [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101465487, updated on 8-Mar-2024

Summary

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Gene symbol
rab30
Gene description
RAB30, member RAS oncogene family
See related
Ensembl:ENSMZEG00005024032
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See rab30 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
5
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (29798961..29803698)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531778.1 (1623981..1628730, complement)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone responsive Neighboring gene NADH:ubiquinone oxidoreductase subunit C2 Neighboring gene prolylcarboxypeptidase (angiotensinase C) Neighboring gene family with sequence similarity 181 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    29798961..29803698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004560532.4 → XP_004560589.2  ras-related protein Rab-30 isoform X2

    See identical proteins and their annotated locations for XP_004560589.2

    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  2. XM_004560533.4 → XP_004560590.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_004560590.1

    UniProtKB/TrEMBL
    A0A3P9DDM4
    Related
    ENSMZEP00005032262.1, ENSMZET00005033306.1
    Conserved Domains (1) summary
    cd04114
    Location:19 → 187
    Rab30; Rab GTPase family 30 (Rab30)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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