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Pgant1 Polypeptide N-Acetylgalactosaminyltransferase 1 [ Ceratitis capitata (Mediterranean fruit fly) ]

Gene ID: 101462694, updated on 24-May-2024

Summary

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Gene symbol
Pgant1
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 1
See related
EnsemblRapid:LOC101462694
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratitis capitata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis
Also known as
GALT1
Orthologs
fruit fly all
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Genomic context

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See Pgant1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Ccap_2.1 (GCF_000347755.3) Unplaced Scaffold NW_019376365.1 (488290..497480, complement)

NW_019376365.1Genomic Context describing neighboring genes Neighboring gene nose resistant to fluoxetine protein 6 Neighboring gene Kinesin heavy chain 73 Neighboring gene uncharacterized LOC110117779 Neighboring gene homeobox protein unplugged

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019376365 Unplaced Scaffold Reference Ccap_2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California. Calla B, et al. BMC Genomics, 2014 Feb 5. PMID 24495485, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratitis capitata Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccap_2.1 Primary Assembly

Genomic

  1. NW_019376365.1 Reference Ccap_2.1 Primary Assembly

    Range
    488290..497480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004522564.3 → XP_004522621.1  polypeptide N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_004522621.1

    UniProtKB/TrEMBL
    W8B5B2
    Related
    XP_004522621.1, XM_004522564.3
    Conserved Domains (2) summary
    cd02510
    Location:175 → 484
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:496 → 621
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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