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CLDN20 claudin 20 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101445859, updated on 8-Mar-2024

Summary

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Gene symbol
CLDN20
Gene description
claudin 20
See related
Ensembl:ENSDNOG00000030729
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See CLDN20 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 28 NC_080700.1 (39800870..39805468)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004468923.1 (650783..661131, complement)

Chromosome 28 - NC_080700.1Genomic Context describing neighboring genes Neighboring gene TATA-box-binding protein Neighboring gene TIAM Rac1 associated GEF 2 Neighboring gene transcription factor B1, mitochondrial Neighboring gene NADPH oxidase 3 Neighboring gene dnaJ homolog subfamily B member 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080700.1 Reference mDasNov1.hap2

    Range
    39800870..39805468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023587166.2 → XP_023442934.1  claudin-20

    Conserved Domains (1) summary
    cl21598
    Location:24 → 181
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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Gene LinkOut

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