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CNTNAP1 contactin associated protein 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101440808, updated on 8-Mar-2024

Summary

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Gene symbol
CNTNAP1
Gene description
contactin associated protein 1
See related
Ensembl:ENSDNOG00000013866
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See CNTNAP1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 21 NC_080693.1 (61938006..61952130)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004503859.1 (498757..512426, complement)

Chromosome 21 - NC_080693.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H3 Neighboring gene uncharacterized LOC111762197 Neighboring gene C-C motif chemokine receptor 10 Neighboring gene 5'-3' exonuclease PLD3-like Neighboring gene enhancer of zeste 1 polycomb repressive complex 2 subunit Neighboring gene nucleosome assembly protein 1-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
contactin-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080693.1 Reference mDasNov1.hap2

    Range
    61938006..61952130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004484601.4 → XP_004484658.1  contactin-associated protein 1 isoform X1

    Related
    ENSDNOP00000010769.3
    Conserved Domains (7) summary
    smart00294
    Location:1303 → 1321
    4.1m; putative band 4.1 homologues' binding motif
    smart00231
    Location:23 → 167
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    smart00282
    Location:1082 → 1217
    LamG; Laminin G domain
    cd00057
    Location:35 → 166
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:173 → 329
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00008
    Location:543 → 574
    EGF; EGF-like domain
    cl00085
    Location:583 → 657
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

  2. XM_058284290.1 → XP_058140273.1  contactin-associated protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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