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CLDN10 claudin 10 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101439409, updated on 8-Mar-2024

Summary

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Gene symbol
CLDN10
Gene description
claudin 10
See related
Ensembl:ENSDNOG00000015086
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See CLDN10 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 15 NC_080687.1 (39637775..39790660, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004478598.1 (4404139..4557626)

Chromosome 15 - NC_080687.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C3 Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene ATP binding cassette subfamily C member 4 (PEL blood group) Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080687.1 Reference mDasNov1.hap2

    Range
    39637775..39790660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004457724.4 → XP_004457781.1  claudin-10 isoform X2

    Conserved Domains (1) summary
    cl21598
    Location:19 → 177
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_058276500.1 → XP_058132483.1  claudin-10 isoform X3

  3. XM_004457723.4 → XP_004457780.1  claudin-10 isoform X1

    Related
    ENSDNOP00000011685.2
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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Gene LinkOut

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