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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101411362, updated on 8-Mar-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Also known as
PTPLAD2
Orthologs
human mouse all
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Genomic context

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See HACD4 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 8 NC_080680.1 (64523833..64568667, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004458594.1 (107805..136686)

Chromosome 8 - NC_080680.1Genomic Context describing neighboring genes Neighboring gene focadhesin Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin-associated domain-containing protein 2-like Neighboring gene small nucleolar RNA SNORA1 Neighboring gene interferon alpha-2-like Neighboring gene interferon beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
Names
protein tyrosine phosphatase-like A domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080680.1 Reference mDasNov1.hap2

    Range
    64523833..64568667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058301933.1 → XP_058157916.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X2

  2. XM_004446751.4 → XP_004446808.2  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

  3. XM_023584354.2 → XP_023440122.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X4

    Conserved Domains (1) summary
    pfam04387
    Location:28 → 186
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  4. XM_004446752.3 → XP_004446809.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X3

    Conserved Domains (1) summary
    pfam04387
    Location:53 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  5. XM_004446754.4 → XP_004446811.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X4

    Conserved Domains (1) summary
    pfam04387
    Location:28 → 186
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
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