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YTHDF3-DT YTHDF3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 101410533, updated on 10-Oct-2023

Summary

Official Symbol
YTHDF3-DTprovided by HGNC
Official Full Name
YTHDF3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:48728
See related
Ensembl:ENSG00000270673 AllianceGenome:HGNC:48728
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
YTHDF3-AS1
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Genomic context

See YTHDF3-DT in Genome Data Viewer
Location:
8q12.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (63167725..63168442, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (63592890..63593607, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (64080284..64081001, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene alpha tocopherol transfer protein Neighboring gene TARDBP pseudogene 4 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:64059469-64059969 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27450 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27451 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19241 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:64091666-64092563 Neighboring gene YTH N6-methyladenosine RNA binding protein F3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27452 Neighboring gene RNA, 7SL, cytoplasmic 135, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102684.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BM681776, BM967225, BQ631682
    Related
    ENST00000603538.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    63167725..63168442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    63592890..63593607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)