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GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101386326, updated on 8-Mar-2024

Summary

Gene symbol
GBGT1
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
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Genomic context

See GBGT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450272.1 (33549..41338)

NW_004450272.1Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene carboxyl ester lipase

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004450272.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables globoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450272.1 Reference Oros_1.0 Primary Assembly

    Range
    33549..41338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004392425.1XP_004392482.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3VD13
    Conserved Domains (1) summary
    pfam03414
    Location:60347
    Glyco_transf_6; Glycosyltransferase family 6
  2. XM_012563449.1XP_012418903.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:60119
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold