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PIGS phosphatidylinositol glycan anchor biosynthesis class S [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101386283, updated on 8-Mar-2024

Summary

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Gene symbol
PIGS
Gene description
phosphatidylinositol glycan anchor biosynthesis class S
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See PIGS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450362.1 (2564276..2579311, complement)

NW_004450362.1Genomic Context describing neighboring genes Neighboring gene forkhead box N1 Neighboring gene unc-119 lipid binding chaperone Neighboring gene aldolase, fructose-bisphosphate C Neighboring gene sperm associated antigen 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450362.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-S

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450362.1 Reference Oros_1.0 Primary Assembly

    Range
    2564276..2579311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004399652.1 → XP_004399709.1  GPI transamidase component PIG-S isoform X1

    UniProtKB/TrEMBL
    A0A2U3VW89
    Conserved Domains (1) summary
    pfam10510
    Location:22 → 550
    PIG-S; Phosphatidylinositol-glycan biosynthesis class S protein

  2. XM_004399653.2 → XP_004399710.1  GPI transamidase component PIG-S isoform X2

    UniProtKB/TrEMBL
    A0A2U3VW56
    Conserved Domains (1) summary
    pfam10510
    Location:1 → 453
    PIG-S; Phosphatidylinositol-glycan biosynthesis class S protein
Nucleotide Protein
Heading Accession and Version

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