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B4GALT6 beta-1,4-galactosyltransferase 6 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101384375, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALT6
Gene description
beta-1,4-galactosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See B4GALT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450939.1 (1221081..1285196)

NW_004450939.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 125 Neighboring gene cytochrome b-c1 complex subunit 7 pseudogene Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene uncharacterized LOC105758146 Neighboring gene transthyretin Neighboring gene desmoglein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450939.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450939.1 Reference Oros_1.0 Primary Assembly

    Range
    1221081..1285196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004412925.2 → XP_004412982.1  beta-1,4-galactosyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004412982.1

    UniProtKB/TrEMBL
    A0A2U3WU83
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_004412926.2 → XP_004412983.1  beta-1,4-galactosyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WUJ2
    Conserved Domains (1) summary
    cd00899
    Location:116 → 332
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_012566835.1 → XP_012422289.1  beta-1,4-galactosyltransferase 6 isoform X3

    Conserved Domains (2) summary
    cd00899
    Location:158 → 332
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    pfam13733
    Location:108 → 203
    Glyco_transf_7N; N-terminal region of glycosyl transferase group 7
Nucleotide Protein
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