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ATP6AP2 ATPase H+ transporting accessory protein 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101384231, updated on 8-Mar-2024

Summary

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Gene symbol
ATP6AP2
Gene description
ATPase H+ transporting accessory protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See ATP6AP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450363.1 (2514097..2533272)

NW_004450363.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L28 pseudogene Neighboring gene RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene Neighboring gene chromosome unknown CXorf38 homolog Neighboring gene mitochondrial pyruvate carrier 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450363.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
renin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450363.1 Reference Oros_1.0 Primary Assembly

    Range
    2514097..2533272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004399727.2 → XP_004399784.1  renin receptor isoform X1

    UniProtKB/TrEMBL
    A0A2U3VWL8
    Conserved Domains (2) summary
    pfam07850
    Location:255 → 351
    Renin_r; Renin receptor-like protein
    pfam10232
    Location:146 → 215
    Med8; Mediator of RNA polymerase II transcription complex subunit 8

  2. XM_004399728.1 → XP_004399785.1  renin receptor isoform X2

    UniProtKB/TrEMBL
    A0A2U3VWK0
    Conserved Domains (2) summary
    pfam07850
    Location:254 → 350
    Renin_r; Renin receptor-like protein
    pfam10232
    Location:145 → 214
    Med8; Mediator of RNA polymerase II transcription complex subunit 8
Nucleotide Protein
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