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INPP5F inositol polyphosphate-5-phosphatase F [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101383683, updated on 8-Mar-2024

Summary

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Gene symbol
INPP5F
Gene description
inositol polyphosphate-5-phosphatase F
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See INPP5F in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450468.1 (2590038..2673015, complement)

NW_004450468.1Genomic Context describing neighboring genes Neighboring gene SEC23 interacting protein Neighboring gene 60S ribosomal protein L13-like Neighboring gene minichromosome maintenance complex binding protein Neighboring gene vacuolar ATPase assembly integral membrane protein vma21-like Neighboring gene BAG cochaperone 3 Neighboring gene TIA1 cytotoxic granule associated RNA binding protein like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450468.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450468.1 Reference Oros_1.0 Primary Assembly

    Range
    2590038..2673015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004404023.2 → XP_004404080.1  phosphatidylinositide phosphatase SAC2

    UniProtKB/TrEMBL
    A0A2U3W797
    Conserved Domains (2) summary
    pfam02383
    Location:50 → 415
    Syja_N; SacI homology domain
    pfam12456
    Location:595 → 697
    hSac2; Inositol phosphatase
Nucleotide Protein
Heading Accession and Version

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