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GBA2 glucosylceramidase beta 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101383515, updated on 8-Mar-2024

Summary

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Gene symbol
GBA2
Gene description
glucosylceramidase beta 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GBA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450270.1 (2961413..2972916, complement)

NW_004450270.1Genomic Context describing neighboring genes Neighboring gene tropomyosin 2 Neighboring gene talin 1 Neighboring gene cAMP responsive element binding protein 3 Neighboring gene RGP1 homolog, RAB6A GEF complex partner 1 Neighboring gene microseminoprotein, prostate associated Neighboring gene natriuretic peptide receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450270.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-lysosomal glucosylceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450270.1 Reference Oros_1.0 Primary Assembly

    Range
    2961413..2972916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004392258.1 → XP_004392315.1  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A2U3VCL9
    Conserved Domains (3) summary
    pfam04685
    Location:513 → 880
    DUF608; Protein of unknown function, DUF608
    pfam06202
    Location:579 → 739
    GDE_C; Amylo-alpha-1,6-glucosidase
    pfam12215
    Location:158 → 447
    GBA2_N; beta-Glucocerebrosidase 2 N terminal
Nucleotide Protein
Heading Accession and Version

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