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TKTL1 transketolase like 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101383224, updated on 8-Mar-2024

Summary

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Gene symbol
TKTL1
Gene description
transketolase like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See TKTL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450679.1 (860437..884298)

NW_004450679.1Genomic Context describing neighboring genes Neighboring gene opsin 1, long wave sensitive Neighboring gene testis expressed 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450679.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450679.1 Reference Oros_1.0 Primary Assembly

    Range
    860437..884298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004409189.1 → XP_004409246.1  transketolase-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WKA2
    Conserved Domains (4) summary
    cd07033
    Location:294 → 449
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:18 → 592
    PRK05899; transketolase; Reviewed
    cd02012
    Location:30 → 246
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:465 → 587
    Transketolase_C; Transketolase, C-terminal domain

  2. XM_004409190.1 → XP_004409247.1  transketolase-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WK59
    Conserved Domains (4) summary
    cd07033
    Location:288 → 443
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:18 → 586
    PRK05899; transketolase; Reviewed
    cd02012
    Location:30 → 240
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:459 → 581
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
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